VERB4D
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Reads in all the data files created in Matlab in order to initialize the parameters. More...
#include <iostream>
#include <iomanip>
#include <string>
#include <sstream>
#include <fstream>
#include <stdio.h>
#include <stdlib.h>
#include "Logger.h"
#include "UpdatableMatrix.h"
#include "Matrix.h"
#include "Parameters.h"
Go to the source code of this file.
Functions | |
bool | ReadInitialData (string &InputFolder, string &OutputFolder, int argc, char *argv[], double &total_time, double &dt, double &output_time, double &time_first, long int &it_first, int &max_threads, string &inversion_method, string &use_matlab, string &include_boundary, Matrix4D< double > &PSD, Matrix4D< double > &P, Matrix4D< double > &R, Matrix4D< double > &V, Matrix4D< double > &K, UpdatableMatrix< Matrix4D< double > > &L, int &P_size, int &R_size, int &V_size, int &K_size, int &L_size, Matrix3D< double > &P_LBC, Matrix3D< double > &P_UBC, UpdatableMatrix< Matrix3D< double > > &R_LBC, UpdatableMatrix< Matrix3D< double > > &R_UBC, UpdatableMatrix< Matrix3D< double > > &V_LBC, UpdatableMatrix< Matrix3D< double > > &V_UBC, UpdatableMatrix< Matrix3D< double > > &K_LBC, UpdatableMatrix< Matrix3D< double > > &K_UBC, UpdatableMatrix< Matrix3D< double > > &L_LBC, UpdatableMatrix< Matrix3D< double > > &L_UBC, string &P_LBC_type, string &P_UBC_type, string &R_LBC_type, string &R_UBC_type, string &V_LBC_type, string &V_UBC_type, string &K_LBC_type, string &K_UBC_type, string &L_LBC_type, string &L_UBC_type, UpdatableListMatrix< Matrix4D< double > > &DLL, UpdatableListMatrix< Matrix4D< double > > &DVV, UpdatableListMatrix< Matrix4D< double > > &DKK, UpdatableListMatrix< Matrix4D< double > > &DVK, UpdatableMatrix< Matrix4D< double > > &VP, UpdatableMatrix< Matrix4D< double > > &VL, UpdatableMatrix< Matrix4D< double > > &G_local, UpdatableMatrix< Matrix4D< double > > &G_radial, UpdatableListMatrix< Matrix4D< double > > &Sources, UpdatableListMatrix< Matrix4D< double > > &Losses) |
Reads in all the data files created in Matlab in order to initialize the parameters.
Created on: Oct 5, 2012 Author: dimath
bool ReadInitialData | ( | string & | InputFolder, |
string & | OutputFolder, | ||
int | argc, | ||
char * | argv[], | ||
double & | time_total, | ||
double & | time_step, | ||
double & | time_output, | ||
double & | time_first, | ||
long int & | it_first, | ||
int & | max_threads, | ||
string & | inversion_method, | ||
string & | use_matlab, | ||
string & | include_boundary, | ||
Matrix4D< double > & | PSD, | ||
Matrix4D< double > & | P, | ||
Matrix4D< double > & | R, | ||
Matrix4D< double > & | V, | ||
Matrix4D< double > & | K, | ||
UpdatableMatrix< Matrix4D< double > > & | L, | ||
int & | P_size, | ||
int & | R_size, | ||
int & | V_size, | ||
int & | K_size, | ||
int & | L_size, | ||
Matrix3D< double > & | PSD_l_P, | ||
Matrix3D< double > & | PSD_u_P, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_l_R, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_u_R, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_l_V, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_u_V, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_l_K, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_u_K, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_l_L, | ||
UpdatableMatrix< Matrix3D< double > > & | PSD_u_L, | ||
string & | Pl_BC_type, | ||
string & | Pu_BC_type, | ||
string & | Rl_BC_type, | ||
string & | Ru_BC_type, | ||
string & | Vl_BC_type, | ||
string & | Vu_BC_type, | ||
string & | Kl_BC_type, | ||
string & | Ku_BC_type, | ||
string & | Ll_BC_type, | ||
string & | Lu_BC_type, | ||
UpdatableListMatrix< Matrix4D< double > > & | DLL, | ||
UpdatableListMatrix< Matrix4D< double > > & | DVV, | ||
UpdatableListMatrix< Matrix4D< double > > & | DKK, | ||
UpdatableListMatrix< Matrix4D< double > > & | DVK, | ||
UpdatableMatrix< Matrix4D< double > > & | VP, | ||
UpdatableMatrix< Matrix4D< double > > & | VL, | ||
UpdatableMatrix< Matrix4D< double > > & | G_local, | ||
UpdatableMatrix< Matrix4D< double > > & | G_radial, | ||
UpdatableListMatrix< Matrix4D< double > > & | Sources, | ||
UpdatableListMatrix< Matrix4D< double > > & | Losses | ||
) |
Reads in all the data created in Matlab in order to initialize the parameters
Using Parameters::getParameter() for timesteps, number of threads, input and output folders, boundary condition types
Using AllocateMemory() for all the matrices
Using UpdatableMatrix<MatrixND>::update() for G_local and G_radial
Using UpdatableMatrix<MatrixND>::readFromIniFile() for all boundary conditions and data tables/matrices
InputFolder | - Folder to get input from |
OutputFolder | - Folder to write output to |
argc | - number of arguments given |
argv | - array of string arguments inputted |
time_total,step,output,first | - time variables for calculations |
max_threads | - number of threads that can be used |
inversion_method | - tool for doing calculations, usually Lapack |
PSD | - Phase Space Density Matrix |
P,R,V,K,L | - matrices for Phi, Actual Distance, Energy, Pitch Angle, Distance due to magnetic field, respectively |
P,R,V,K,L | _size - sizes for the corresponding matrices |
PSD_l_ | P,R,V,K,L - lower boundaries for PSD with respect to P,R,V,K,L |
PSD_u_ | P,R,V,K,L - upper boundaries for PSD with respect to P,R,V,K,L |
BC_type | - Type of boundary condition for each matrix - either BCT_CONSTANT_VALUE or BCT_CONSTANT_DERIVATIVE |
DLL,DVV,DKK,DVK | - diffusion matrices |
G_local,G_radial | - Jacobians for normalizing data |
Sources,Losses | - matrices for calculating Sources and Losses(loss cone) |